eef1a1 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (34)

Nucleotides (19948)

Interactants (69)

XB-GENEPAGE-480093

Gene Symbol: eef1a1 Gene Name: eukaryotic translation elongation factor 1 alpha 1 Synonyms: EF-1 alpha, eef1a-s, elongation factor-1 alpha Add Xenopus synonyms Gene Function: cytoplasmic protein required for protein synthesis Interactants: 42Sp50(6) , odc1(5) , gtf3a(3) , myc(3) , 42Sp43(2) , eef1a2(2) , sp1(2) View All

XB-GENE-480094

XB-GENE-865341

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001016692\|Xenopus (Silurana) tropicalis eukaryotic translation elongation factor 1 alpha 1 (eef1a1), mRNA CCCGGGGGGCGAGTTTTAAGTGTCCACCGCCAAACATCTAACAATCCACAATGGGAAAGGAAAAGACTCACATCAACATCGTCGTCATTGGACACGTAGATTCTGGAAAGTCCACAACAACTGGACATCTTATCTACAAATGTGGTGGTATCGACAAGAGAACCATCGAAAAGTTCGAGAAGGAAGCTGCTGAGATGGGCAAGGGCTCCTTCAAGTACGCCTGGGTCTTGGACAAACTGAAGGCCGAGCGTGAACGTGGTATCACCATTGACATCTCCCTGTGGAAATTTGAGACCAGCAAATATTATGTTACTATCATTGATGCTCCAGGACACAGAGACTTCATCAAGAACATGATCACTGGTACCTCTCAGGCTGACTGTGCTGTCCTGATTGTTGCTGCTGGTGTTGGTGAATTTGAAGCTGGTATCTCAAAGAACGGACAAACTCGTGAGCATGCCCTCCTTGCCTACACTCTGGGAGTAAAGCAACTGATCGTTGGTGTTAACAAAATGGATTCAACTGAACCCCCATACAGCCAGAAAAGATATGAGGAAATCGTTAAGGAAGTCAGCACATACATCAAGAAGATTGGTTACAACCCTGACACTGTTGCCTTTGTACCTATTTCTGGATGGAACGGTGACAACATGCTTGAGCCCAGCGCCAATATGCCTTGGTTTAAGGGGTGGAAAATCTCACGTAAAGAGGGATCTGGCAGCGGAACTACCCTGCTGGAAGCTCTTGACTGCATTTTGCCACCAAGTCGCCCAACTGATAAGCCTCTGCGTCTGCCTCTGCAGGATGTCTACAAAATTGGCGGTATTGGTACTGTACCAGTTGGTCGTGTGGAGACTGGTGTCCTTAAGCCAGGCATGGTGGTTACTTTTGCCCCTGTTAATGTAACAACTGAAGTTAAATCTGTTGAAATGCACCATGAAGCCCTTAGCGAGGCCATGCCCGGTGACAATGTTGGCTTTAACGTGAAAAACGTTTCTGTGAAGGACGTCCGTCGTGGCAACGTTGCTGGTGACAGCAAGAATGACCCACCAATGGAAGCTGGTACCTTTACAGCACAGGTTATCATCCTGAACCACCCAGGCCAGATTGGTGCTGGATATGCCCCTGTGTTGGATTGCCACACAGCTCACATTGCTTGCAAGTTTGCTGAGCTGAAGGAAAAGATTGATCGCCGTTCTGGTAAGAAACTGGAAGACAATCCCAAGTTCCTGAAGTCTGGTGATGCTGCCATTGTTGACATGATCCCAGGAAAGCCTATGTGCGTGGAGAGCTTCTCTGACTACCCCCCTCTTGGTCGTTTTGCTGTCCGTGACATGAGGCAGACTGTTGCTGTAGGAGTCATCAAGGCGGTCGATAAGAAGGCTGCTGGAGCTGGCAAAGTCACAAAGTCTGCTCAGAAAGCACAGAAAGGCAAATGAATATTTCCAGCATCTCTCACCTCAGTCATAACCAGTGGTGGAGGATTGGTCTCAGAACTCTTTCTATCAATTGGCCATCAGAGTTTAATAGTCAAAGACTGGTTAATGATTACAATGCATCGCAAAAGCTTCAGAAGGAAAAAAATGCTCGTGGACACATTTGTTTGTGGCAGTTTTTAAGTTATTAGTGTTTTAAATCCAGTAATTTCTAAATGGAAGCAACTTGACCAAAATCTGTCACCAAATTGAGACCATTAAAAAAAAGTTAAAAGATAACAAAAAAAAAAAAAA	Refseq >NM_001087442\|Xenopus laevis eukaryotic translation elongation factor 1 alpha 1 (eef1a1), mRNA CGGACGCGTGGGTAAGTGTCCACCGCCAAACATCTAATAATCCACAATGGGAAAGGAAAAGACTCACATCAACATCGTTGTCATTGGACACGTCGATTCTGGAAAGTCCACAACAACTGGCCATCTGATCTACAAATGTGGTGGCATCGACAAGAGAACCATTGAAAAGTTCGAGAAGGAAGCTGCCGAGATGGGAAAAGGCTCCTTCAAGTATGCCTGGGTCTTGGACAAACTGAAGGCAGAGCGTGAACGTGGTATCACCATTGACATCTCCCTGTGGAAATTTGAGACCAGCAAATACTATGTCACTATCATTGATGCTCCAGGACACAGAGATTTCATCAAGAACATGATCACTGGTACTTCTCAGGCCGACTGTGCTGTCCTGATTGTTGCTGCTGGTGTTGGTGAATTTGAAGCTGGTATCTCAAAGAATGGACAAACCCGTGAGCATGCTCTCCTTGCCTACACTCTGGGTGTTAAGCAGCTGATCGTTGGTATTAACAAAATGGATTCCACTGAACCACCATACAGCCAGAAGAGATATGAGGAAATTGTAAAGGAAGTCAGCACATACATCAAGAAAATTGGTTACAACCCTGACACTGTTGCCTTTGTGCCTATTTCTGGATGGAACGGTGACAACATGCTTGAGCCCAGCCCCAATATGCCTTGGTTTAAGGGATGGAAAATCACACGTAAAGAGGGATCTGGCAGCGGAACTACCCTGCTGGAAGCTCTTGACTGCATTTTGCCACCATCTCGCCCAACCGATAAGCCTCTCCGTCTGCCTCTGCAGGATGTCTACAAAATTGGCGGTATTGGTACTGTACCAGTTGGTCGTGTGGAGACTGGTGTCATTAAACCAGGCATGGTGGTTACCTTTGCCCCTGTCAATGTAACAACTGAAGTGAAATCTGTTGAAATGCACCATGAAGCCCTTACTGAGGCCGTGCCCGGTGACAACGTTGGTTTTAACGTCAAGAACGTATCTGTGAAGGACGTCCGTCGTGGCAACGTTGCTGGTGACAGCAAGAATGACCCACCAATGGAAGCTGGTTCATTTACCGCACAGGTTATCATCCTGAACCACCCAGGCCAGATTGGTGCTGGATATGCCCCTGTGTTGGATTGTCACACTGCTCACATTGCTTGCAAGTTTGCTGAGCTCAAGGAGAAGATTGATCGCCGTTCTGGTAAGAAACTGGAAGACAATCCCAAGTTCCTGAAGTCTGGTGATGCTGCCATTGTTGACATGATCCCAGGAAAGCCAATGTGCGTGGAGAGCTTCTCTGACTACCCTCCTCTTGGTCGTTTTGCTGTTCGTGACATGAGACAGACCGTTGCTGTAGGAGTAATCAAGGCAGTCGAGAAGAAGGCAGCAGGATCCGGCAAAGTCACAAAGTCTGCTCAGAAAGCCGCGAAAACGAAATGAATATTTCCAGAATATCTTGCCTCAGTCATAACTAGGGCTGAAGGATTGGTCTCAGAACTCTTTCTATCAATTGGCCATCAGAGTTTAATAGTCAAAGACTGGTTAATGATTACAATGCATCGCAAAAGCTTCAGAAGGAAAGAAATGCTTGCGGACACATTTGTTTGTGGCAGTTTTAAGTTATTAGTGTTTTAAATCCAGTAATTTCTAAATGGGAGGCAACTTGACCAAAATCTGTCACCAAATTTGAGACCATTAAAAAAAAAAAAAAGTTGAAAAGAAAAAAAAAAAAAAA
Protein		Refseq >NP_001016692\|eukaryotic translation elongation factor 1 alpha 1 [Xenopus (Silurana) tropicalis] MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKISRKEGSGSGTTLLEALDCILPPSRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEAMPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAGTFTAQVIILNHPGQIGAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQKAQKGK	Refseq >NP_001080911\|elongation factor 1-alpha, somatic form [Xenopus laevis] MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSPNMPWFKGWKITRKEGSGSGTTLLEALDCILPPSRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAGSFTAQVIILNHPGQIGAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVEKKAAGSGKVTKSAQKAAKTK UniProtKB

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		[+] Str.69532 Str.71233 Str.68223 Str.84337	Xl.17432 [+] Xl.46764 Xl.75561 Xl.82692 Xl.83359
Unigene EST Profile			EST Profile
GEO data			GEO
Images		2 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	EEF1A1
mouse		MGI	Eef1a1	All(1) Targeted, other(1)
zebrafish		ZFIN	eef1a1l1	4 Lines(s)

Publications
First:		42S p48--the most abundant protein in previtellogenic Xenopus oocytes--resembles elongation factor 1 alpha structurally and functionally. [EMBO J 1987]
Most recent:		Identification and expression analysis of GPAT family genes during early development of Xenopus laevis. [Gene Expr Patterns 2013]
		View All Papers 1 paper(s) referencing morpholinos

Functional Ontologies
GO: Molecular:		GTP binding GTPase activity protein-synthesizing GTPase activity More[+] translation elongation factor activity
Biological:		translation translational elongation
Cellular Component:		cytoplasm
EC:		protein-synthesizing GTPase
KOG:		[J] Translation elongation factor EF-1 alpha/Tu

Reagents		tropicalis	laevis
Clones			EXRC - 1 clone(s)
			open biosystems
			geneservice/RZPD imagenes
Affymetrix 1.0		Str.8139.1.S1_x_at [+] AFFX-Str-ef1a-3_at AFFX-Str-ef1a-5_at AFFX-Str-ef1a-M_at Str.26170.1.A1_x_at Str.24986.1.A1_at Str.43535.1.A1_at Str.43541.1.A1_at Str.43743.1.A1_at Str.43857.1.A1_at Str.43865.1.A1_at Str.43957.1.A1_at Str.44074.1.A1_at Str.44077.1.A1_at Str.44390.1.A1_at Str.44506.1.A1_at Str.45491.1.A1_x_at Str.46134.1.A1_at Str.46648.1.A1_x_at Str.46648.1.A1_at Str.46814.1.A1_at Str.45971.1.A1_at	Xl.17432.1.S1_at [+] Xl.17432.1.S2_at Xl.6063.1.A1_at
Affymetrix 2.0			Xl2.46764.1.A1_at [+] Xl2.48153.1.A1_at Xl2.53225.1.S1_at

Symbol legend[+]