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Summary Expression Phenotypes Gene Literature (0) GO Terms (44) Nucleotides (133) Proteins (54) Interactants (31) Wiki
XB-GENEPAGE-966857

Show:     All X. tropicalis X. laevis

Nucleotide sequences for setx - All

RefSeq mRNAs(7)
Models - Gene (25)
Models - mRNA (39)
mRNAs (8)
ESTs (26)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
XM_002936175 XM_002936175.5 probable helicase senataxin 9742 bp XP_002936221 X. tropicalis
XM_031890972 XM_031890972.1 XP_031746832.1 probable helicase senataxin 9621 bp XP_031746832 X. tropicalis
XM_018229546 XM_018229546.2 probable helicase senataxin isoform X1 7932 bp XP_018085035 X. laevis.L
XM_018229547 XM_018229547.2 probable helicase senataxin isoform X1 7815 bp XP_018085036 X. laevis.L
XM_018229548 XM_018229548.2 probable helicase senataxin isoform X1 7959 bp XP_018085037 X. laevis.L
XM_018229551 XM_018229551.2 probable helicase senataxin isoform X2 7929 bp XP_018085040 X. laevis.L
XM_041572421 XM_041572421.1 XP_041428355.1 probable helicase senataxin isoform X3 7765 bp XP_041428355 X. laevis.L

Models - Gene (25)

Source Version Model Species
NCBI 10.1 XBXL10_1g34391 X. laevis.L
NCBI 10.0 XBXT10g003707 X. tropicalis
ENSEMBL 10.0 setx X. tropicalis
Xenbase 9.2 gene173 X. laevis.L
JGI 9.1 Xelaev18038407m.g X. laevis.L
Xenbase 9.1 gene834 X. tropicalis
ENSEMBL 9.1 setx X. tropicalis
JGI 7.1 Xetro.H00126 X. tropicalis
JGI 6.0 XeXenL6RMv10010535m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000006254 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1910097 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1910235 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1910150 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1910019 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_191000020 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1910144 X. tropicalis
JGI 4.1 e_gw1.191.145.1 X. tropicalis
JGI 4.1 e_gw1.191.151.1 X. tropicalis
JGI 4.1 e_gw1.191.236.1 X. tropicalis
JGI 4.1 e_gw1.191.97.1 X. tropicalis
JGI 4.1 gw1.191.145.1 X. tropicalis
JGI 4.1 gw1.191.151.1 X. tropicalis
JGI 4.1 gw1.191.236.1 X. tropicalis
JGI 4.1 gw1.191.97.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1910017 X. tropicalis

mRNAs based on gene models(39)

Source Version Model Species
NCBI 10.1 XBmRNA64909 X. laevis.L
ENSEMBL 10.0 ENSXETT00000100622 X. tropicalis
ENSEMBL 10.0 ENSXETT00000071393 X. tropicalis
ENSEMBL 10.0 ENSXETT00000095661 X. tropicalis
ENSEMBL 10.0 ENSXETT00000080384 X. tropicalis
ENSEMBL 10.0 ENSXETT00000093253 X. tropicalis
NCBI 10.0 mRNA018721 X. tropicalis
Xenbase 9.2 rna478 X. laevis.L
ENSEMBL 9.1 ENSXETT00000095661 X. tropicalis
JGI 9.1 Xelaev18038407m X. laevis.L
Xenbase 9.1 rna2672 X. tropicalis
ENSEMBL 9.1 ENSXETT00000057247 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100622 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071393 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080384 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093253 X. tropicalis
JGI 7.1 Xetro.H00126.1 X. tropicalis
JGI 7.1 Xetro.H00126.2 X. tropicalis
JGI 6.0 XeXenL6RMv10010535m X. laevis.L
ENSEMBL 4.1 ENSXETT00000057251 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1910019 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1910017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1910097 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1910144 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1910150 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1910235 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_191000020 X. tropicalis
JGI 4.1 gw1.191.145.1 X. tropicalis
JGI 4.1 gw1.191.151.1 X. tropicalis
JGI 4.1 gw1.191.236.1 X. tropicalis
JGI 4.1 gw1.191.97.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000057247 X. tropicalis
ENSEMBL 4.1 ENSXETT00000057244 X. tropicalis
ENSEMBL 4.1 ENSXETT00000057242 X. tropicalis
ENSEMBL 4.1 ENSXETT00000013715 X. tropicalis
JGI 4.1 e_gw1.191.97.1 X. tropicalis
JGI 4.1 e_gw1.191.236.1 X. tropicalis
JGI 4.1 e_gw1.191.151.1 X. tropicalis
JGI 4.1 e_gw1.191.145.1 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:7648029 BC161047 X. tropicalis NIH_XGC_tropBrn2 brain frog
XM_002936175 X. tropicalis
XM_031890972 X. tropicalis
XM_018229546 X. laevis.L
XM_018229547 X. laevis.L
XM_018229548 X. laevis.L
XM_018229551 X. laevis.L
XM_041572421 X. laevis.L

ESTs (26)

Clone Accession 5'/3' Species Library Anatomy Stage
st2m06 DC171901 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7690673 CX915576 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7523356 CX473120 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7798769 DN059390 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
xthr39G08 CN112837 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7800847 DR833594 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
THdA037a15 CR574735 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7805174 DR841349 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7648029 CX807081 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7805581 DR841863 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8955546 EL653056 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:7532265 CX432792 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7648156 CX807301 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7690673 CX915575 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7532265 CX432791 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7523356 CX473119 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA037a15 CR574736 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr39G08 CN112836 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7648029 CX807080 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648156 CX807300 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7798769 DN059389 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7800847 DR833593 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7805174 DR841348 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7805581 DR841862 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
XL071g14 BJ074776 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL071g14 BJ081367 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25