Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (7) Nucleotides (461) Proteins (94) Interactants (132) Wiki
XB-GENEPAGE-1004177

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ythdc1 - All

Models - Gene (35)
Models - mRNA (63)
mRNAs (16)
ESTs (257)

Models - Gene (35)

Source Version Model Species
NCBI 10.0 XBXT10g003254 X. tropicalis
NCBI 10.1 XBXL10_1g1346 X. laevis.L
JGI 9.1 Xelaev18009579m.g X. laevis.S
ENSEMBL 10.0 ythdc1 X. tropicalis
JGI 9.1 Xelaev18005905m.g X. laevis.L
Xenbase 9.1 gene3011 X. tropicalis
Xenbase 9.2 gene40155 X. laevis.L
ENSEMBL 9.1 ythdc1 X. tropicalis
JGI 8.0 Xetrov14003933m.g X. tropicalis
JGI 7.1 Xetro.A02540 X. tropicalis
JGI 7.2 Xelaev16064192m.g X. laevis.L
JGI 6.0 XeXenL6RMv10015873m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000017960 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2140025 X. tropicalis
JGI 4.1 e_gw1.214.63.1 X. tropicalis
JGI 4.1 e_gw1.214.81.1 X. tropicalis
JGI 4.1 e_gw1.214.82.1 X. tropicalis
JGI 4.1 gw1.214.63.1 X. tropicalis
JGI 4.1 gw1.214.81.1 X. tropicalis
JGI 4.1 gw1.214.82.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2140013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2140063 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2140081 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2140082 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2140002 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2140003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2140026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2140027 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2140006 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_214000002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_214000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_214000026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_214000027 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_214000028 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_214000007 X. tropicalis

Models - mRNA (63)

Source Version Model Species
NCBI 10.0 mRNA016552 X. tropicalis
NCBI 10.1 XBmRNA2254 X. laevis.L
ENSEMBL 10.0 ENSXETT00000085671 X. tropicalis
ENSEMBL 10.0 ENSXETT00000038938 X. tropicalis
ENSEMBL 10.0 ENSXETT00000098258 X. tropicalis
ENSEMBL 10.0 ENSXETT00000067455 X. tropicalis
ENSEMBL 10.0 ENSXETT00000054717 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085503 X. tropicalis
JGI 9.1 Xelaev18005905m X. laevis.L
JGI 9.1 Xelaev18009579m X. laevis.S
Xenbase 9.1 rna9877 X. tropicalis
Xenbase 9.2 rna82029 X. laevis.L
ENSEMBL 9.1 ENSXETT00000085671 X. tropicalis
ENSEMBL 9.1 ENSXETT00000038938 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098258 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067455 X. tropicalis
ENSEMBL 9.1 ENSXETT00000054717 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085503 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073577 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091901 X. tropicalis
JGI 8.0 Xetrov14003933m X. tropicalis
JGI 7.1 Xetro.A02540.1 X. tropicalis
JGI 7.1 Xetro.A02540.2 X. tropicalis
JGI 7.1 Xetro.A02540.3 X. tropicalis
JGI 7.1 Xetro.A02540.4 X. tropicalis
JGI 7.1 Xetro.A02540.5 X. tropicalis
JGI 7.1 Xetro.A02540.6 X. tropicalis
JGI 7.1 Xetro.A02540.7 X. tropicalis
JGI 7.1 Xetro.A02540.8 X. tropicalis
JGI 7.1 Xetro.A02540.9 X. tropicalis
JGI 7.1 Xetro.A02540.10 X. tropicalis
JGI 7.1 Xetro.A02540.11 X. tropicalis
JGI 7.1 Xetro.A02540.12 X. tropicalis
JGI 7.1 Xetro.A02540.13 X. tropicalis
JGI 7.1 Xetro.A02540.14 X. tropicalis
JGI 7.1 Xetro.A02540.15 X. tropicalis
JGI 7.1 Xetro.A02540.16 X. tropicalis
JGI 7.2 Xelaev16064192m X. laevis.L
JGI 6.0 XeXenL6RMv10015873m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_2140025 X. tropicalis
ENSEMBL 4.1 ENSXETT00000038938 X. tropicalis
ENSEMBL 4.1 ENSXETT00000054717 X. tropicalis
JGI 4.1 e_gw1.214.63.1 X. tropicalis
JGI 4.1 e_gw1.214.81.1 X. tropicalis
JGI 4.1 e_gw1.214.82.1 X. tropicalis
JGI 4.1 gw1.214.63.1 X. tropicalis
JGI 4.1 gw1.214.81.1 X. tropicalis
JGI 4.1 gw1.214.82.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2140013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2140063 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2140081 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2140082 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2140002 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2140003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2140026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2140027 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2140006 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_214000002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_214000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_214000026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_214000027 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_214000028 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_214000007 X. tropicalis

mRNAs (16)

Clone Accession Species Library Anatomy Stage
NM_001008120 X. tropicalis
IMAGE:6991485 BC081325 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TEgg068m02 CT030071 X. tropicalis
XM_012960472 X. tropicalis
XM_012960466 X. tropicalis
XM_012960461 X. tropicalis
XM_012960459 X. tropicalis
IMAGE:5079426 BC084321 X. laevis.L
NM_001094824 X. laevis.L
XM_041581977 X. laevis.L
XM_041581971 X. laevis.L
XM_041581967 X. laevis.L
XM_041581962 X. laevis.L
XM_041581959 X. laevis.L
XM_041581954 X. laevis.L
XM_041581949 X. laevis.L

ESTs (257)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9020083 EL869284 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8917291 EL830277 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8913672 EL826159 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8913250 EL825262 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8924541 EL669607 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8963997 EL657559 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8953830 EL656733 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8955902 EL654019 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
xtbs30P10 CN089010 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
st64f23 DC182520 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st54n17 DC180177 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st28i24 DC171248 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st36b09 DC173606 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st17j11 DC167867 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st14i22 DC166959 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st10h10 DC165732 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st112n11 DC195365 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st85k05 DC187879 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT4722 CX400878 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT3587 CX399055 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO7161 CX940494 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7785933 CX317268 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7625760 CX379239 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7579897 CX418964 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7579843 CX418921 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7578032 CX424154 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7578093 CX423922 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576822 CX422440 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7611283 CX378210 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610332 CX376802 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7606241 CX366419 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7599154 CX343477 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598760 CX388509 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7597611 CX386227 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7545021 CX486747 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541719 CX448435 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539907 CX460775 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539763 CX460769 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538398 CX450622 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534354 CX428908 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568625 CX456663 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565087 CX481508 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7558088 CX497052 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555589 CX502814 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555235 CX502026 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7566947 CX506820 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560341 CX515809 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557545 CX506007 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551310 CX510964 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7654852 CX824541 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7804639 DR839626 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7750501 DN049011 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7734190 DN019105 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7733525 DN017370 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7720413 CX984095 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7717999 CX979790 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7711617 CX968003 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7710727 CX966775 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7709508 CX964899 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7703476 CX939864 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7693505 CX920562 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7668235 CX855232 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7522777 CX471783 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA005j07 CR589257 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA051a01 CR584398 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA022b09 CR582693 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA030e20 CR573263 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA018i04 CR569630 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA002o21 CR560662 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA039m12 CR439328 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA042e01 CR432753 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA025m08 CR419200 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA025g01 CR418266 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA047n19 CR417406 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr02A04 CN119672 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr43G14 CN115783 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas086l15 BX752722 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas126i18 AL972249 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas122p11 AL970755 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas110j09 AL960028 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas130m06 AL959283 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas081g02 AL777342 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas071n18 AL773922 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas028h11 AL652867 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas020n07 AL632717 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas013f15 AL632121 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas019e04 AL631662 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA074o02 BX736262 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu086h05 AL803073 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas026i04 AL647261 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu081l14 AL800656 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu141f08 AL799005 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu118b14 AL793986 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu094c15 AL791191 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu085o07 AL787136 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu052l13 AL673257 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu042a06 AL662561 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu043g17 AL660303 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu034j23 AL657040 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21