Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (9) Nucleotides (169) Proteins (63) Interactants (9) Wiki
XB-GENEPAGE-1009042

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for sh3pxd2b - All

Models - Gene (31)
Models - mRNA (38)
mRNAs (10)
ESTs (51)

Models - Gene (31)

Source Version Model Species
NCBI 10.0 XBXT10g016371 X. tropicalis
NCBI 10.1 XBXL10_1g12320 X. laevis.L
NCBI 10.1 XBXL10_1g16469 X. laevis.S
ENSEMBL 10.0 sh3pxd2b X. tropicalis
JGI 9.1 Xelaev18017234m.g X. laevis.L
JGI 9.1 Xelaev18021428m.g X. laevis.S
Xenbase 9.1 gene22470 X. tropicalis
Xenbase 9.2 gene43353 X. laevis.L
Xenbase 9.2 gene2811 X. laevis.S
ENSEMBL 9.1 art1 X. tropicalis
JGI 8.0 Xetrov14015291m.g X. tropicalis
JGI 7.1 Xetro.C01380 X. tropicalis
JGI 7.2 Xelaev16023728m.g X. laevis.L
JGI 6.0 XeXenL6RMv10011519m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000018790 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_7310008 X. tropicalis
JGI 4.1 e_gw1.731.1.1 X. tropicalis
JGI 4.1 e_gw1.731.21.1 X. tropicalis
JGI 4.1 e_gw1.731.29.1 X. tropicalis
JGI 4.1 e_gw1.731.5.1 X. tropicalis
JGI 4.1 gw1.731.1.1 X. tropicalis
JGI 4.1 gw1.731.21.1 X. tropicalis
JGI 4.1 gw1.731.29.1 X. tropicalis
JGI 4.1 gw1.731.5.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_7310005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7310001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7310005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7310021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_7310004 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_731000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_731000008 X. tropicalis

Models - mRNA (38)

Source Version Model Species
NCBI 10.0 mRNA080995 X. tropicalis
NCBI 10.1 XBmRNA23025 X. laevis.L
NCBI 10.1 XBmRNA30916 X. laevis.S
ENSEMBL 10.0 ENSXETT00000094341 X. tropicalis
ENSEMBL 10.0 ENSXETT00000088670 X. tropicalis
ENSEMBL 10.0 ENSXETT00000102428 X. tropicalis
JGI 9.1 Xelaev18017234m X. laevis.L
JGI 9.1 Xelaev18021428m X. laevis.S
Xenbase 9.1 rna45496 X. tropicalis
Xenbase 9.2 rna86711 X. laevis.L
Xenbase 9.2 rna8170 X. laevis.S
ENSEMBL 9.1 ENSXETT00000088670 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102428 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094341 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103847 X. tropicalis
ENSEMBL 9.1 ENSXETT00000025784 X. tropicalis
JGI 8.0 Xetrov14015291m X. tropicalis
JGI 7.1 Xetro.C01380.2 X. tropicalis
JGI 7.1 Xetro.C01380.1 X. tropicalis
JGI 7.2 Xelaev16023728m X. laevis.L
JGI 6.0 XeXenL6RMv10011519m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_7310008 X. tropicalis
ENSEMBL 4.1 ENSXETT00000025784 X. tropicalis
JGI 4.1 e_gw1.731.1.1 X. tropicalis
JGI 4.1 e_gw1.731.21.1 X. tropicalis
JGI 4.1 e_gw1.731.29.1 X. tropicalis
JGI 4.1 e_gw1.731.5.1 X. tropicalis
JGI 4.1 gw1.731.1.1 X. tropicalis
JGI 4.1 gw1.731.21.1 X. tropicalis
JGI 4.1 gw1.731.29.1 X. tropicalis
JGI 4.1 gw1.731.5.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_7310005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7310001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7310005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7310021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_7310004 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_731000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_731000008 X. tropicalis

mRNAs (10)

Clone Accession Species Library Anatomy Stage
TEgg053h03 CR760676 X. tropicalis
NM_001016567 X. tropicalis
IMAGE:6323364 BC088911 X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
XM_018256144 X. laevis.S
XM_018256143 X. laevis.S
XM_018256142 X. laevis.S
XM_018252165 X. laevis.L
XM_018252164 X. laevis.L
XM_018252163 X. laevis.L
XM_018252162 X. laevis.L

ESTs (51)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9019326 EL868257 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8868989 EL709074 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
st51f10 DC179344 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7785373 CX316168 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7601752 CX365077 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7543828 CX459715 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7535373 CX476035 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556929 CX504768 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7805471 DR841761 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7720262 CX994960 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7720002 CX983896 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7518999 CX478562 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA004b17 CR589424 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas097g09 AL970802 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas093f14 AL962329 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas112i12 AL960182 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas077f14 AL775383 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas071n20 AL773923 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas029g19 AL652779 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas007n19 AL633379 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas017g14 AL629378 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA039p08 BX736329 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA068a19 BX735820 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA017m18 BX714453 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu115f11 AL794911 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu018m10 AL638447 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5336652 BQ522289 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
L1G9f11 AL637550 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:9019326 EL868258 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8868989 EL709073 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
rst51f10 DC149049 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7543828 CX459714 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7720262 CX994959 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7556929 CX504767 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7805471 DR841760 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7720002 CX983895 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7518999 CX478561 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7535373 CX476034 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7601752 CX365076 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7785373 CX316167 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA004b17 CR589425 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas097g09 BX755190 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas071n20 BX751244 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas077f14 AL955465 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA017m18 BX714454 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu115f11 BX694944 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5336652 BQ522288 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
xlk143h19ex DC049628 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:6863648 CA987083 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6323364 CA971827 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
rxlk143h19ex DC016334 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5