Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (4) Nucleotides (150) Proteins (41) Interactants (13) Wiki
XB-GENEPAGE-5857445

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for pbdc1 - All

Models - Gene (31)
Models - mRNA (32)
mRNAs (5)
ESTs (53)

Models - Gene (31)

Source Version Model Species
NCBI 10.0 XBXT10g006860 X. tropicalis
NCBI 10.1 XBXL10_1g15337 X. laevis.S
ENSEMBL 10.0 pbdc1 X. tropicalis
JGI 9.1 Xelaev18020198m.g X. laevis.S
Xenbase 9.1 gene5661 X. tropicalis
Xenbase 9.2 gene13270 X. laevis.S
ENSEMBL 9.1 pbdc1 X. tropicalis
JGI 8.0 Xetrov14012465m.g X. tropicalis
JGI 7.1 Xetro.C00296 X. tropicalis
JGI 7.2 Xelaev16055246m.g X. laevis.S
JGI 6.0 XeXenL6RMv10018643m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000010543 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_340017 X. tropicalis
JGI 4.1 e_gw1.34.113.1 X. tropicalis
JGI 4.1 e_gw1.34.501.1 X. tropicalis
JGI 4.1 e_gw1.34.591.1 X. tropicalis
JGI 4.1 gw1.34.113.1 X. tropicalis
JGI 4.1 gw1.34.501.1 X. tropicalis
JGI 4.1 gw1.34.591.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_340040 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340113 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340501 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340591 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_340008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_340039 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_340040 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_34000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_34000009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_34000040 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_34000041 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_34000017 X. tropicalis

Models - mRNA (32)

Source Version Model Species
NCBI 10.0 mRNA033956 X. tropicalis
NCBI 10.1 XBmRNA28659 X. laevis.S
ENSEMBL 10.0 ENSXETT00000023116 X. tropicalis
JGI 9.1 Xelaev18020198m X. laevis.S
Xenbase 9.1 rna18365 X. tropicalis
Xenbase 9.2 rna38623 X. laevis.S
ENSEMBL 9.1 ENSXETT00000023116 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075867 X. tropicalis
JGI 8.0 Xetrov14012465m X. tropicalis
JGI 7.1 Xetro.C00296.1 X. tropicalis
JGI 7.2 Xelaev16055246m X. laevis.S
JGI 6.0 XeXenL6RMv10018643m X. laevis.S
JGI 4.1 estExt_fgenesh1_pm.C_340017 X. tropicalis
ENSEMBL 4.1 ENSXETT00000023116 X. tropicalis
JGI 4.1 e_gw1.34.113.1 X. tropicalis
JGI 4.1 e_gw1.34.501.1 X. tropicalis
JGI 4.1 e_gw1.34.591.1 X. tropicalis
JGI 4.1 gw1.34.113.1 X. tropicalis
JGI 4.1 gw1.34.501.1 X. tropicalis
JGI 4.1 gw1.34.591.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_340040 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340113 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340501 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340591 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_340008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_340039 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_340040 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_34000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_34000009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_34000040 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_34000041 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_34000017 X. tropicalis

mRNAs (5)

Clone Accession Species Library Anatomy Stage
NM_001016364 X. tropicalis
TEgg068o19 CR761293 X. tropicalis
IMAGE:7625460 BC135688 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7011139 BC081264 X. laevis.S
NM_001094344 X. laevis.S

ESTs (53)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8931591 EL666570 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
CAAO5264 CX937051 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7625460 CX378616 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7601147 CX363929 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598442 CX387780 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7851241 DT390457 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7620823 DR898355 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7801964 DR835332 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7738946 DN027744 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7708009 CX961284 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7668881 CX874970 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TNeu142p20 AL803896 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu089a06 AL785195 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8931591 EL666569 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
CAAO5264 CX937050 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7851241 DT390456 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7708009 CX961283 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7801964 DR835331 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7738946 DN027743 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7598442 CX387779 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7625460 CX378615 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620823 CX341397 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu089a06 BX693680 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xlk8h19ex DC062066 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk113l07ex DC039994 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk66m20ex DC056402 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk78o19ex DC060608 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8317927 DY575354 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8321532 DY545244 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7979825 DR727928 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7976377 DR717025 5' X. laevis.S NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7982361 DR716568 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL481b21ex BP697299 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL455j23ex BP687865 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL218e14 BJ627498 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL190c07 BJ619691 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL189o15 BJ619633 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL068e03 BJ062524 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL032p11 BJ042812 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL015p10 BJ032205 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5514040 CF286861 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6932324 CB941415 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
PBX0098C05 AW640726 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxlk66m20ex DC022981 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk78o19ex DC027133 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7976377 DR717068 3' X. laevis.S NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XL218e14 BJ643797 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL190c07 BJ636324 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL189o15 BJ636264 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL077f20 BJ081921 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL032p11 BJ056768 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL015p10 BJ047240 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XENOPUS_SOURCE_ID:xlnga001c09 AW148191 3' X. laevis.S normalized Xenopus laevis gastrula whole organism NF stage 10.5 to NF stage 11.5