Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (5) Nucleotides (215) Proteins (51) Interactants (30) Wiki
XB-GENEPAGE-948884

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for zc3hc1 - All

Models - Gene (32)
Models - mRNA (34)
mRNAs (7)
ESTs (110)

Models - Gene (32)

Source Version Model Species
NCBI 10.0 XBXT10g003674 X. tropicalis
NCBI 10.1 XBXL10_1g12885 X. laevis.L
NCBI 10.1 XBXL10_1g16008 X. laevis.S
ENSEMBL 10.0 zc3hc1 X. tropicalis
JGI 9.1 Xelaev18017898m.g X. laevis.L
JGI 9.1 Xelaev18020881m.g X. laevis.S
Xenbase 9.1 gene25199 X. tropicalis
Xenbase 9.2 gene18397 X. laevis.L
Xenbase 9.2 gene39577 X. laevis.S
ENSEMBL 9.1 zc3hc1 X. tropicalis
JGI 8.0 Xetrov14013939m.g X. tropicalis
JGI 7.1 Xetro.C02082 X. tropicalis
JGI 7.2 Xelaev16007264m.g X. laevis.L
JGI 6.0 XeXenL6RMv10040780m.g X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_11000034 X. tropicalis
JGI 4.1 e_gw1.11.165.1 X. tropicalis
JGI 4.1 e_gw1.11.233.1 X. tropicalis
JGI 4.1 e_gw1.11.77.1 X. tropicalis
JGI 4.1 gw1.11.165.1 X. tropicalis
JGI 4.1 gw1.11.233.1 X. tropicalis
JGI 4.1 gw1.11.77.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_110021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_110077 X. tropicalis
JGI 4.1 estExt_Genewise1.C_110165 X. tropicalis
JGI 4.1 estExt_Genewise1.C_110230 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_110008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_110033 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_110034 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_110012 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_11000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_11000033 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_11000012 X. tropicalis

Models - mRNA (34)

Source Version Model Species
NCBI 10.0 mRNA018587 X. tropicalis
NCBI 10.1 XBmRNA24350 X. laevis.L
NCBI 10.1 XBmRNA29941 X. laevis.S
ENSEMBL 10.0 ENSXETT00000061662 X. tropicalis
JGI 9.1 Xelaev18017898m X. laevis.L
JGI 9.1 Xelaev18020881m X. laevis.S
Xenbase 9.1 rna49928 X. tropicalis
Xenbase 9.2 rna53741 X. laevis.L
Xenbase 9.2 rna81209 X. laevis.S
ENSEMBL 9.1 ENSXETT00000061662 X. tropicalis
JGI 8.0 Xetrov14013939m X. tropicalis
JGI 7.1 Xetro.C02082.3 X. tropicalis
JGI 7.1 Xetro.C02082.2 X. tropicalis
JGI 7.1 Xetro.C02082.1 X. tropicalis
JGI 7.2 Xelaev16007264m X. laevis.L
JGI 6.0 XeXenL6RMv10040780m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_11000034 X. tropicalis
JGI 4.1 e_gw1.11.165.1 X. tropicalis
JGI 4.1 e_gw1.11.233.1 X. tropicalis
JGI 4.1 e_gw1.11.77.1 X. tropicalis
JGI 4.1 gw1.11.165.1 X. tropicalis
JGI 4.1 gw1.11.233.1 X. tropicalis
JGI 4.1 gw1.11.77.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_110021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_110077 X. tropicalis
JGI 4.1 estExt_Genewise1.C_110165 X. tropicalis
JGI 4.1 estExt_Genewise1.C_110230 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_110008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_110033 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_110034 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_110012 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_11000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_11000033 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_11000012 X. tropicalis

mRNAs (7)

Clone Accession Species Library Anatomy Stage
NM_001011259 X. tropicalis
IMAGE:6977335 BC087863 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TGas089c14 CT030355 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:4033395 BC061669 X. laevis.L
NM_001090121 X. laevis.L
XM_018255691 X. laevis.S
XM_018255690 X. laevis.S

ESTs (110)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8887485 EL845242 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8916486 EL829589 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8915252 EL828017 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8866751 EL705055 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8964789 EL663535 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
st99i13 DC192615 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8943528 EG651795 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
XZT4799 CX401008 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO8277 CX955657 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7789006 CX334691 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7578269 CX416041 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576513 CX431646 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7549530 CX484826 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543340 CX459019 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAO4772 CX936160 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7555413 CX502254 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7673115 CX882105 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7669725 CX876162 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
THdA026d18 CR577428 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA041m23 CR434062 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas127m06 AL961602 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas089c14 AL959622 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas073c14 AL784012 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas085c05 AL954965 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu114k10 AL787511 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas065e16 AL674875 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu019d08 AL637789 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu001e08 AL634326 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu001f08 AL634658 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6988953 CF219873 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6977335 CF150061 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5380065 BQ524117 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
L1G3c5 AL643744 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8866751 EL705054 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
rst99i13 DC162646 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst19j11 DC138348 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT4799 CX401007 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO8277 CX955656 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7549530 CX484825 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAO4772 CX936159 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7673115 CX882104 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7669725 CX876161 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7555413 CX502253 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7548603 CX490713 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521277 CX469098 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543340 CX459018 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537227 CX445588 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532774 CX433607 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7578269 CX416040 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7789006 CX334690 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA026d18 CR577429 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas127m06 BX761077 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas104i01 BX754235 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas065e16 BX746169 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu114k10 BX698465 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5380065 BQ524116 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:4461259 BG812363 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
xl321d22 DC129368 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl246l16 DC107777 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk158p07ex DC063747 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8643347 EB737769 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
IMAGE:7981812 DR722724 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7975069 DR721985 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7975433 DR718292 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7982001 DR714857 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL520e18ex BP707277 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL435l18ex BP680746 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL472p24ex BP697282 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL439m10ex BP682118 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL439d08ex BP681926 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL426j01ex BP677342 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL183f14 BJ618028 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL159b24 BJ612412 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL101o09 BJ073894 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL055g03 BJ070048 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL060l15 BJ058833 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL062c15 BJ059298 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL070k19 BJ063241 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL014g22 BJ031730 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6864106 CA987452 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6863830 CA987238 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5571818 BQ736334 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5542942 BQ734973 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4683952 BQ732546 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5572581 BQ732342 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4680343 BI445417 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4203690 BG552996 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3748399 BE681354 5' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
PBX0048E05 AW636590 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XENOPUS_SOURCE_ID:xlnoc001g02 AW147404 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
rxl246l16 DC073305 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl321d22 DC093611 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk158p07ex DC030235 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7981812 DR722773 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7975069 DR722019 3' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7982001 DR714865 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL435l18ex BP717319 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL520e18ex BP739579 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL472p24ex BP728252 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5