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Summary Expression Phenotypes Gene Literature (9) GO Terms (3) Nucleotides (125) Proteins (38) Interactants (115) Wiki
XB-GENEPAGE-958609

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ccs - All

Models - Gene (21)
Models - mRNA (26)
mRNAs (4)
ESTs (53)

Models - Gene (21)

Source Version Model Species
NCBI 10.0 XBXT10g010700 X. tropicalis
NCBI 10.1 XBXL10_1g18450 X. laevis.L
ENSEMBL 10.0 ccs X. tropicalis
JGI 9.1 Xelaev18022324m.g X. laevis.L
Xenbase 9.1 gene16622 X. tropicalis
Xenbase 9.2 gene11281 X. laevis.L
ENSEMBL 9.1 ccs X. tropicalis
JGI 8.0 Xetrov14017751m.g X. tropicalis
JGI 7.1 Xetro.D01125 X. tropicalis
JGI 7.2 Xelaev16076289m.g X. laevis.L
JGI 6.0 XeXenL6RMv10054574m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000011424 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_628000008 X. tropicalis
JGI 4.1 e_gw1.628.10.1 X. tropicalis
JGI 4.1 e_gw1.628.42.1 X. tropicalis
JGI 4.1 e_gw1.628.57.1 X. tropicalis
JGI 4.1 gw1.628.10.1 X. tropicalis
JGI 4.1 gw1.628.42.1 X. tropicalis
JGI 4.1 gw1.628.57.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_628000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_628000009 X. tropicalis

Models - mRNA (26)

Source Version Model Species
NCBI 10.0 mRNA052994 X. tropicalis
NCBI 10.1 XBmRNA33905 X. laevis.L
ENSEMBL 10.0 ENSXETT00000064314 X. tropicalis
ENSEMBL 10.0 ENSXETT00000095318 X. tropicalis
JGI 9.1 Xelaev18022324m X. laevis.L
Xenbase 9.1 rna36362 X. tropicalis
Xenbase 9.2 rna32808 X. laevis.L
ENSEMBL 9.1 ENSXETT00000095318 X. tropicalis
ENSEMBL 9.1 ENSXETT00000064314 X. tropicalis
ENSEMBL 9.1 ENSXETT00000024941 X. tropicalis
JGI 8.0 Xetrov14017751m X. tropicalis
JGI 7.1 Xetro.D01125.2 X. tropicalis
JGI 7.1 Xetro.D01125.3 X. tropicalis
JGI 7.1 Xetro.D01125.1 X. tropicalis
JGI 7.2 Xelaev16076289m X. laevis.L
JGI 6.0 XeXenL6RMv10054574m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_628000008 X. tropicalis
ENSEMBL 4.1 ENSXETT00000024941 X. tropicalis
JGI 4.1 e_gw1.628.10.1 X. tropicalis
JGI 4.1 e_gw1.628.42.1 X. tropicalis
JGI 4.1 e_gw1.628.57.1 X. tropicalis
JGI 4.1 gw1.628.10.1 X. tropicalis
JGI 4.1 gw1.628.42.1 X. tropicalis
JGI 4.1 gw1.628.57.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_628000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_628000009 X. tropicalis

mRNAs (4)

Clone Accession Species Library Anatomy Stage
NM_001011020 X. tropicalis
IMAGE:7027707 BC082734 X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:4968880 BC077488 X. laevis.L
NM_001093342 X. laevis.L

ESTs (53)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8922424 EL837033 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8919352 EL833363 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8928800 EL677128 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
CABC9491 DR840737 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7637532 CX407516 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7601520 CX364584 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAN10956 CX926392 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7706463 CX958375 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7794510 CX929258 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690690 CX915691 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690276 CX915116 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690124 CX914347 5' X. tropicalis NIH_XGC_tropTe4 testis frog
THdA026j17 CR573705 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA015f15 CR566318 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA070g04 CR441713 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA059f23 CR430096 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7027707 CF782014 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:8922424 EL837034 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8919352 EL833364 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8928800 EL677127 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
CABC9491 DR840736 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7637532 CX407515 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAN10956 CX926391 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7706463 CX958374 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7794510 CX929257 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690276 CX915115 3' X. tropicalis NIH_XGC_tropTe4 testis frog
THdA026j17 CR573706 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA015f15 CR566319 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA059f23 CR430097 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xlk121d14ex DC042385 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk121j07ex DC042503 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL487p03ex BP699515 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL457c11ex BP688356 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL439h24ex BP682027 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL434o24ex BP680476 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL162f01 BJ613131 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL071p11 BJ074947 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL009f02 BJ040995 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
PBX0095F10 AW640486 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0048D03 AW636577 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl275f04 DC081271 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk121j07ex DC009448 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL520d24ex BP739564 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL503m19ex BP735011 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL480f02ex BP730394 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL457c11ex BP723593 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL434o24ex BP717110 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL219p24 BJ644242 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL183l23 BJ634670 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL175a03 BJ632536 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL162f01 BJ629667 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL009f02 BJ055362 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3402277 BG019807 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10