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Summary Expression Phenotypes Gene Literature (0) GO Terms (3) Nucleotides (230) Proteins (49) Interactants (10) Wiki
XB-GENEPAGE-974049

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for trir - All

Models - Gene (20)
Models - mRNA (26)
mRNAs (12)
ESTs (131)

Models - Gene (20)

Source Version Model Species
NCBI 10.0 XBXT10g004917 X. tropicalis
NCBI 10.1 XBXL10_1g14247 X. laevis.L
NCBI 10.1 XBXL10_1g17202 X. laevis.S
ENSEMBL 10.0 trir X. tropicalis
JGI 9.1 Xelaev18019086m.g X. laevis.L
JGI 9.1 Xelaev18000815m.g X. laevis.S
Xenbase 9.1 gene2968 X. tropicalis
Xenbase 9.2 gene4726 X. laevis.L
Xenbase 9.2 gene8421 X. laevis.S
ENSEMBL 9.1 trir X. tropicalis
JGI 8.0 Xetrov14044108m.g X. tropicalis
JGI 7.1 Xetro.F01611 X. tropicalis
JGI 7.2 Xelaev16062226m.g X. laevis.L
JGI 6.0 XeXenL6RMv10045880m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000004768 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3770006 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3770013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3770016 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_377000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_377000016 X. tropicalis

Models - mRNA (26)

Source Version Model Species
NCBI 10.0 mRNA024430 X. tropicalis
NCBI 10.1 XBmRNA26877 X. laevis.L
NCBI 10.1 XBmRNA31892 X. laevis.S
ENSEMBL 10.0 ENSXETT00000010334 X. tropicalis
JGI 9.1 Xelaev18019086m X. laevis.L
JGI 9.1 Xelaev18000815m X. laevis.S
Xenbase 9.1 rna9717 X. tropicalis
Xenbase 9.2 rna24515 X. laevis.S
Xenbase 9.2 rna13809 X. laevis.L
ENSEMBL 9.1 ENSXETT00000010334 X. tropicalis
JGI 8.0 Xetrov14044108m X. tropicalis
JGI 7.1 Xetro.F01611.1 X. tropicalis
JGI 7.1 Xetro.F01611.2 X. tropicalis
JGI 7.1 Xetro.F01611.3 X. tropicalis
JGI 7.1 Xetro.F01611.4 X. tropicalis
JGI 7.1 Xetro.F01611.5 X. tropicalis
JGI 7.1 Xetro.F01611.6 X. tropicalis
JGI 7.1 Xetro.F01611.7 X. tropicalis
JGI 7.2 Xelaev16062226m X. laevis.L
JGI 6.0 XeXenL6RMv10045880m X. laevis.L
JGI 4.1 estExt_fgenesh1_kg.C_3770006 X. tropicalis
ENSEMBL 4.1 ENSXETT00000010334 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3770013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3770016 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_377000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_377000016 X. tropicalis

mRNAs (12)

Clone Accession Species Library Anatomy Stage
TNeu137f12 CR942708 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7585009 BC135272 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:6995290 BC158437 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
NM_001126585 X. tropicalis
XM_012964271 X. tropicalis
IMAGE:3377960 BC097823 X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:7981224 BC106411 X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:4057143 BC085227 X. laevis.S
NM_001096067 X. laevis.L
XM_018239643 X. laevis.S
XM_018239642 X. laevis.S
XM_018251221 X. laevis.L

ESTs (131)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu075c05 BX683497 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:9017719 EL865904 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8882992 EL838460 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8932426 EL668409 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8965055 EL661553 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
st86g20 DC188060 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st48k03 DC178715 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st69d22 DC183745 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st65p06 DC182911 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st60c20 DC181455 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st59m10 DC181364 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st9n19 DC175821 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st45p13 DC178090 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st42p08 DC177380 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st26f15 DC170607 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st22n10 DC169620 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st13p05 DC166774 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st12d22 DC166260 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st111l18 DC194824 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st97i10 DC192105 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st83h12 DC187339 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO9275 CX957504 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7788696 CX334363 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7619046 CX346475 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7611450 CX378332 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7603816 CX395349 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7602294 CX365723 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO4420 CX935517 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7533665 CX427497 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7714083 CX973005 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7668448 CX874627 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7667365 CX853878 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7666781 CX852506 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7513805 CX743079 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7512983 CX742120 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7530450 CX419632 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7585009 CX415802 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA049o15 CR432656 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas119g09 AL969919 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas111j19 AL963979 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas100m13 AL956157 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas071h13 AL773724 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas038l19 AL648248 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas020c21 AL632489 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas048g10 AL646229 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu137f12 AL786105 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu075c05 AL785676 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu064j05 AL783516 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas064b05 AL675310 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas063b05 AL675217 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6995290 CF239155 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6986909 CF221643 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6987015 CF221530 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5379779 BQ523990 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:5383957 BQ396627 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:9017719 EL865905 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
rst90m07 DC159030 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst111l18 DC164189 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst86g20 DC157938 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst83h12 DC157213 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst45p13 DC147804 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst42p08 DC147098 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst65p06 DC152682 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst60c20 DC151190 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst59m10 DC151093 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst9n19 DC145520 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst97i10 DC162127 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst69d22 DC153548 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst48k03 DC148439 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst26f15 DC140447 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst23n10 DC139754 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst22n10 DC139462 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst18m23 DC138122 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst13p05 DC136697 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst12d22 DC136194 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO9275 CX957503 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO4420 CX935516 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7672403 CX880804 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7668448 CX874626 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7714083 CX973004 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7667365 CX853877 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7513805 CX743078 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7512983 CX742119 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7585009 CX415801 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7603816 CX395348 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7611450 CX378331 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7602294 CX365722 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7619046 CX346474 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7788696 CX334362 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas119g09 BX756401 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas071h13 BX751149 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas064b05 BX745571 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu081o17 BX694251 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu064j05 BX687168 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5379779 BQ523989 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:5383957 BQ396626 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
xlk166l18ex DC066251 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk1h03ex DC053097 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk101p06ex DC036254 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5