XB-CLONE-3305584
Clone Name: IMAGE:7658828
|
Gene:
cdh13
|
Species: Xenopus tropicalis
|
|
|
Sequence:
Full length sequence: BC136209 [+]
GCATGAATGAAAACGCCTCCAGTCGCTGCTAGCTCGGCAATATGGATCACAAATCGCAAGTCGCCCTGTCCATGGTGCTGTCCCAGGTGCTGGTATTTGC
CATTGCAAATGATTTGGAGTGCATCCCGGGATTCCAACAGAAGATATTCTATGTAGAGCAGCCATCAGAATTTACAGAGGATCAACTTGTTTTGAATGTA
CAATTCAATGACTGCAGCGGGAATGATGAGGTGATATATGAAGTTTCAAACCCTGATTTTAAAGTGGAACCTGATGGGTCATTAATTGCGCTAAGGAATA
TTACAGAAGTGGTACGGGTATTATTTATCCATGCACGGTCTCCTCATACAGATGATATGGCGGAAGTAAAGATTCTTGGAAGAAAGGAAAGACACAATTC
CTCAAAGAATGTACTTAAGGTCCCAAGGCACCTTCCTTTCCTGAGGCACAGAAGAGCAATTGTGGCTCCTTCTATCTCAATTCCAGAGAATCAAAGAATC
CCCTTTCCCAAAATTGTCGGCAGGGTGGTTGTAAGTGATCGGGTACCAGGCTCTAAAATACGATTGTATGGCAAAGGAGTGGATCAGGAGCCCAAGGGAA
CTTTTAGAATAAATGAAAACACAGGAGAGGTCTCTGTGACGAAAGCCCTTGACAGAGAGGCAATTCCATCATATCAGCTTCAAGTTGAAACCACTGATGA
GAATGGAAAGACTATTGAGGGCCCTGTTGACCTTGAAATCCTTATAATTGATCAAAATGATAACAGACCAATCTTTAGAGAGGGACCATATGTTGGCCAT
GTGTTGGAAGGATCACCAACAGGAACCACAGTGATGCATATGATAGCTTTTGATGCTGATGATCCAACAACAGATAATGCCGTGCTGCGCTATAACATTC
TTAGACAGACTCCAGATAAGCCATCACCAAACATGTTCTACATTGATCCAGAGAAGGGCGACATTGTCACCGTTGTTTCCCCAGCACTATTAGACCGTGA
GACTCTTTCCACCCCTCAGTATGAACTGATAGTTGAAGCCAAAGATATGGCTGGTATGGATGTTGGTTTGATTGGAACAGCCACAGCAACGATTGTCATT
GATGACAAAAATGATCATCCCCCTGAATTCACAAAAAAGGAGTTTCAGGCAACAGTTAAAGAAGGAGTAACTGGTGTCATGGTCAACCTAACTGTGGAAG
ATAAAGATGACCCAACCACTGGAGCTTGGAAGGCAGTTTATACAATCATCAATGGGAACCCAGGCCAAAGTTTTGAAATCCATACCAATCCAAAGACAAA
TGAAGGCATGCTTTCTGTAGTCAAACCACTGGACTATGAGATTTCTGCATTTCATACGCTGCTGATCAAGGTTGAGAATGAAGACCCCCTGATCCCTGAT
GTTGGCTATGGATCTAGCTCTACTGCAACAGTTCAGATAACTGTATTGGATGTTAATGAAAGCCCAGTATTTCACCCAGATCCAATGACTGTAACAAAAA
AGGAAAATATTCAGATTGGTTCACAGTTGTTCACAGTTAACGCAACCGATCCAGACACACTACAGCATCAGTCCATAAGGTACTCCATACTGAAGGATGA
GGCAGGCTGGCTGTACATTAATCCTCTGAATGGCACAATCAATACAACATCTCCTTTGGACCGCGAATCAACATTTGTCCTGAACAACACTTATACTGCA
CTCATCTTAGCAATTGACAATGGCAGCCCTCCTGCAACTGGAACAGGAACCTTTCAGATTACACTGGAGGATATCAATGACAATGCACCATTCATACATC
CTACCTCTGCATATGTGTGCGAAGACTCAAAAGACTTAACTGTTGTTATCTTGAGCGCATCAGACCGGGACCTTCATCCAAATTCTGACCCTTTCAAATT
TGAGTTAAGCAAACAGACAGGATCCGACAAGGCATGGAAAATTACCCAATTAAACCATACCCATGCCAAGGTCAGTCTTCTGCATAACCTGAAGAGAGCC
AATTACAATCTGCCGGTCACGGTAACAGATTCTGGGAAGCCTCCTTTGAGCAACAGCACAGAACTAAAAGTACAAGTGTGTTCCTGCAAGAAGAGCAAAA
TGGACTGCAGCTCAGCCGATGCTCCCCATGTCAGCATGTTCCTCCTCCTCCTATTTTCACTCTCCAGTTTGTTTTATCTGTAAGTACTGGTGACTTTTAT
AAGCTGACTACTGCATTGCCATGGCAACAGAATGAGAAAAAAAACATTTTCAGAAGAAGTCAGTTTACAGTTACTTCGCGACTAGGCCTCAACTGCTCCA
GATTCAGTTTAATTTGCACCCTCATAAGTCTTTGAAATGGCACACCAGTCCTTGGCAGCATCTGTTCCTGCATTCTTTGTATAAATGGATCCCTGCTGAA
GAAGCACTATGAACCTTTTTGGCTTAAAGGCTTACGAACATTAGTATGAACTTGTCCTTCTCAAGGCAGAAATATTACTTTTACAGCAACGTAAATATTT
TTCTTTTAATGTTATAGTACCCATAACCAAACCTTAAACTGTTTATCCGTCAGATTTGTGTGGGTGTTTTTCATTTCAACACAGGCCAGAGATTTTCCCA
GATGAAAATACAACTTGCGGCTGTAACCAACGTGTCTGAAGAACTCGTGTTGTGTCCACTCAACCGAGACACTTAGAGAAATACTCTAAAGGCTTTCTTA
ATGAGTTCATGTTAATAAGATTACCAATCAGCATATGACAAGGAGAAAGCATTGCAGAGCTGGAATGTTGAAGTAACAGATTAAAGATACATTCACGGTG
CAACTAATATGTAATAAGATGATGCTTAAACACATTGTAAGCCTGTTAGAAATAATTAAAGTACCTTAACTGCTTCGCTGCTGGGAAGCATAAAAAAAAA
GTAGTAATACTTTCAGCCACAAAGGGATATTTGTTACATACATTATAATGTATAATTAGTAGATGAAGAGAGCAGTACAGGTATCCTGCATAGGGATGTT
TAAACTACATCTTTAAAAGTAATTATTATCCCATCAATTATTTAAATATTCCCTTTTTGGTTTTTTTGCACAGTAATGCTGTCATTTTCAGCTGTTGCTA
CATAACATATTTTAAAATTGACATGGTTTTCTTTAATTTTCAACAATTAGAGGCCTATTTATAGTGATTCGAGAATCTGTCCCCTTTTGCTTCGCCAGAA
AATGTGCAAATTTTGCAAAAAATTGACGGAAAATTCTCAAACATTCTGCGAATTCTTGCGCATCAAAAAAAATTGTCAAAAGAAATTTTTTCACGTGAGT
CAAAAAAAATGACACACGCAAAAACATTTTTACTTACACGTCAAAAAACGTGCGCAATATTTTTTTTTATACAGCGAAATTTTCCGCAGTGAATTTTGTC
GCCCATTTTGAACAATAATCCGCCAATGGCAAACCGTGGAAATTTGCTTCAAATCCATGCCTGACAAATTATTTTGCCCATCACTACCTATTTATCAAAA
TTCCAATTTGTGAATTTTTCTAATTTTTTCCTAATTCAAATAAACTCTAAAACATACCAAACTTGAATGGGTCCTCATTTATTAGAAAAACTCAAATATA
AAAAAAAAAAAAAA
5' EST: CX838374 [+]catgaatgaaaacgcctccagtcgctgctagctcggcaatatggatcacaaatcgcaagtcgccctgtccatggtgctgtcccaggtgctggtatttgcc
attgcaaatgatttggagtgcatcccgggattccaacagaagatattctatgtagagcagccatcagaatttacagaggatcaacttgttttgaatgtac
aattcaatgactgcagcgggaatgatgaggtgatatatgaagtttcaaaccctgattttaaagtggaacctgatgggtcattaattgcgctaaggaatat
tacagaagtggtacgggtattatttatccatgcacggtctcctcatacagatgatatggcggaagtaaagattcttggaagaaaggaaagacacaattcc
tcaaagaatgtacttaaggtcccaaggcaccttcctttcctgaggcacagaagagcaattgtggctccttctatctcaattccagagaatcaaagaatcc
cctttcccaaaattgtcggcagggtggttgtaagtgatcgggtaccaggctctaaaatacgattgtatggcaaaggagtggatcaggagcccaagggaac
ttttagaataaatgaaaacacaggagaggtctctgtgacgaaagcccttgacagagaggcaattccatcatatcagcttcaagttgaaaccactgatgag
aatggaaagactattgagggccctgttgaccttgaaatccttataattgatcaaaatgataacagaccaatctttagagagggaccatatgttggccatg
tgttggaaggatcaccaacaggaaccacagtgatgcatatgatagcttttgatgctgatgatccacaacagataatgccgtgctgcgctataacat
3' EST: CX838373 [+]gagtttttctaataaatgaggacccattcaagtttggtatgttttagagtttatttgaattaggaaaaaattagaaaaattcacaaattggaattttgat
aaataggtagtgatgggcaaaataatttgtcaggcatggatttgaagcaaatttccacggtttgccattggcggattattgttcaaaatgggcgacaaaa
ttcactgcggaaaatttcgctgtataaaaaaaaatattgcgcacgttttttgacgtgtaagtaaaaatgtttttgcgtgtgtcattttttttgactcacg
tgaaaaaatttcttttgacaattttttttgatgcgcaagaattcgcagaatgtttgagaattttccgtcaattttttgcaaaatttgcacattttctggc
gaagcaaaaggggacagattctcgaatcactataaataggcctctaattgttgaaaattaaagaaaaccatgtcaattttaaaatatgttatgtagcaac
agctgaaaatgacagcattactgtgcaaaaaaaccaaaaagggaatatttaaataattgatgggataataattacttttaaagatgtagtttaaacatcc
ctatgcaggatacctgtactgctctcttcatctactaattatacattataatgtatgtaacaaatatccctttgtggctgaaagtattactacttttttt
ttatgcttcccagcagcgaagcagttaaggtactttaattatttctaacaggcttacaatgtgtttaagcatcatcttattacatattagttgca
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
Suppliers: