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Secondary structure of mouse 28S rRNA and general model for the folding of the large rRNA in eukaryotes.
Michot B
,
Hassouna N
,
Bachellerie JP
.
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We present a secondary structure model for the entire sequence of mouse 28S rRNA (1) which is based on an extensive comparative analysis of the available eukaryotic sequences, i.e. yeast (2, 3), Physarum polycephalum (4), Xenopus laevis (5) and rat (6). It has been derived with close reference to the models previously proposed for yeast 26S rRNA (2) and for prokaryotic 23S rRNA (7-9). Examination of the recently published eukaryotic sequences confirms that all pro- and eukaryotic large rRNAs share a largely conserved secondary structure core, as already apparent from the previous analysis of yeast 26S rRNA (2). These new comparative data confirm most features of the yeast model (2). They also provide the basis for a few modifications and for new proposals which extend the boundaries of the common structural core (now representing about 85% of E. coli 23S rRNA length) and bring new insights for tracing the structural evolution, in higher eukaryotes, of the domains which have no prokaryotic equivalent and are inserted at specific locations within the common structural core of the large subunit rRNA.
Branlant,
Primary and secondary structures of Escherichia coli MRE 600 23S ribosomal RNA. Comparison with models of secondary structure for maize chloroplast 23S rRNA and for large portions of mouse and human 16S mitochondrial rRNAs.
1981, Pubmed
Branlant,
Primary and secondary structures of Escherichia coli MRE 600 23S ribosomal RNA. Comparison with models of secondary structure for maize chloroplast 23S rRNA and for large portions of mouse and human 16S mitochondrial rRNAs.
1981,
Pubmed
Brosius,
Complete nucleotide sequence of a 23S ribosomal RNA gene from Escherichia coli.
1980,
Pubmed
Chan,
The structure of rat 28S ribosomal ribonucleic acid inferred from the sequence of nucleotides in a gene.
1983,
Pubmed
,
Xenbase
Delanversin,
[Sequence of the central break region of the precursor of Drosophila 26S ribosomal RNA].
1983,
Pubmed
Georgiev,
The structure of the yeast ribosomal RNA genes. 4. Complete sequence of the 25 S rRNA gene from Saccharomyces cerevisae.
1981,
Pubmed
,
Xenbase
Glotz,
Secondary structure of the large subunit ribosomal RNA from Escherichia coli, Zea mays chloroplast, and human and mouse mitochondrial ribosomes.
1981,
Pubmed
Gourse,
Specific binding of a prokaryotic ribosomal protein to a eukaryotic ribosomal RNA: implications for evolution and autoregulation.
1981,
Pubmed
,
Xenbase
Hindenach,
Nucleotide sequence of the 18S-26S rRNA intergene region of the sea urchin.
1984,
Pubmed
Jacq,
Sequence homologies between eukaryotic 5.8S rRNA and the 5' end of prokaryotic 23S rRNa: evidences for a common evolutionary origin.
1981,
Pubmed
,
Xenbase
Kelly,
The nucleotide sequence at the 3'-end of Neurospora crassa 25S-rRNA and the location of a 5.8S-rRNA binding site.
1981,
Pubmed
Kumano,
The complete nucleotide sequence of a 23S rRNA gene from a blue-green alga, Anacystis nidulans.
1983,
Pubmed
Michel,
Comparison of fungal mitochondrial introns reveals extensive homologies in RNA secondary structure.
1982,
Pubmed
Michot,
Sequence and secondary structure of mouse 28S rRNA 5'terminal domain. Organisation of the 5.8S-28S rRNA complex.
1982,
Pubmed
Nazar,
A 5.8 S rRNA-like sequence in prokaryotic 23 S rRNA.
1980,
Pubmed
Noller,
Secondary structure model for 23S ribosomal RNA.
1981,
Pubmed
Otsuka,
Complete nucleotide sequence of the 26S rRNA gene of Physarum polycephalum: its significance in gene evolution.
1983,
Pubmed
Qu,
Improved methods for structure probing in large RNAs: a rapid 'heterologous' sequencing approach is coupled to the direct mapping of nuclease accessible sites. Application to the 5' terminal domain of eukaryotic 28S rRNA.
1983,
Pubmed
Rae,
The 10 kb Drosophila virilis 28S rDNA intervening sequence is flanked by a direct repeat of 14 base pairs of coding sequence.
1980,
Pubmed
,
Xenbase
Roiha,
Duplicated rDNA sequences of variable lengths flanking the short type I insertions in the rDNA of Drosophila melanogaster.
1981,
Pubmed
Schibler,
Changes in size and secondary structure of the ribosomal transcription unit during vertebrate evolution.
1975,
Pubmed
,
Xenbase
Takaiwa,
The complete nucleotide sequence of a 23-S rRNA gene from tobacco chloroplasts.
1982,
Pubmed
Ursi,
Nucleotide sequences of the 5.8S rRNAs of a mollusc and a porifer, and considerations regarding the secondary structure of 5.8S rRNA and its interaction with 28S rRNA.
1983,
Pubmed
Veldman,
The primary and secondary structure of yeast 26S rRNA.
1981,
Pubmed
Ware,
Sequence analysis of 28S ribosomal DNA from the amphibian Xenopus laevis.
1983,
Pubmed
,
Xenbase