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XB-GRNA-23659301
gRNA Name:
rab7a gRNA1
Synonyms: rab7 CRNP (S+L)
Genomic Target: rab7a
Sequence: 5' GGTGATGGTGGATGACAGATTGG 3'
Synonyms: rab7 CRNP (S+L)
Genomic Target: rab7a
Sequence: 5' GGTGATGGTGGATGACAGATTGG 3'
| Genomic Target | tropicalis | laevis.L | laevis.S | ||||
| Identities | 23/23 | 23/23 | 23/23 | ||||
genome
gRNA
|
5' CCAATCTGTCATCCACCATCACC 3' ||||||||||||||||||||||| 3' GGTTAGACAGTAGGTGGTAGTGG 5' |
5' CCAATCTGTCATCCACCATCACC 3' ||||||||||||||||||||||| 3' GGTTAGACAGTAGGTGGTAGTGG 5' |
5' CCAATCTGTCATCCACCATCACC 3' ||||||||||||||||||||||| 3' GGTTAGACAGTAGGTGGTAGTGG 5' |
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| Genomic Alignments |
Position | Identity | Strand | Target | Genomic Target | ||
| laevis 10.1 | Chr4L:135739185..135739207 | 23/23 | Sense | target | rab7a.L | ||
| Chr4S:114785999..114786021 | 23/23 | Sense | target | rab7a.S | |||
| Chr8L:36135427..36135449 | 20/23 | Antisense | off-target | atrx.L | |||
| Chr4L:150232356..150232378 | 20/23 | Antisense | off-target | dnah12.L | |||
| Chr6L:74692023..74692045 | 20/23 | Sense | off-target | ctnnd2.L | |||
| Chr4L:72014933..72014955 | 20/23 | Antisense | off-target | LOC108713520 | |||
| Chr8S:92743874..92743896 | 19/23 | Antisense | off-target | gphn.S | |||
| Chr2S:77207589..77207611 | 19/23 | Sense | off-target | grik3.S | |||
| Chr7L:57591168..57591190 | 19/23 | Sense | off-target | lrmda.L | |||
| Chr8L:71108867..71108889 | 19/23 | Sense | off-target | capn2.L | |||
| Chr2L:115245262..115245284 | 19/23 | Antisense | off-target | slc9a4.L | |||
| Chr1S:154489651..154489673 | 20/23 | unknown | |||||
| Chr9_10L:53680728..53680750 | 20/23 | unknown | |||||
| Chr1S:19666735..19666757 | 20/23 | unknown | |||||
| Chr2L:151576800..151576822 | 19/23 | unknown | |||||
| Chr3L:55516898..55516920 | 19/23 | unknown | |||||
| Chr4S:10924028..10924050 | 19/23 | unknown | |||||
| Chr5S:14934207..14934229 | 19/23 | unknown | |||||
| Chr8L:91756364..91756386 | 19/23 | unknown | |||||
| Chr4S:19020137..19020159 | 19/23 | unknown | tropicalis 10.0 | Chr4:135620862..135620884 | 23/23 | Sense | target | rab7a |
| Chr8:79813549..79813571 | 19/23 | Sense | off-target | capn2 | |||
| Publications | |||||||
| ???morpholino.displaySummary.papersFirst??? |
Rab7 is required for mesoderm patterning and gastrulation in Xenopus., Biol Open 2021 |
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| ???morpholino.displaySummary.papersRecent??? | |||||||
| ???morpholino.displaySummary.papersAll??? | |||||||
