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XB-MORPHOLINO-29231288
Morpholino Name:
ccdc57 MO1
Synonyms: ccdc57 MO
Target mRNA: ccdc57
Morpholino Type: translation blocking morpholino (ATG)
Sequence: 5' ATTCCTCCTCTTTTGGCAACATTTT 3'
Source: Gene Tools LLC
Synonyms: ccdc57 MO
Target mRNA: ccdc57
Morpholino Type: translation blocking morpholino (ATG)
Sequence: 5' ATTCCTCCTCTTTTGGCAACATTTT 3'
Source: Gene Tools LLC
| Target mRNA | tropicalis | laevis.L | |||||
| Identities | 25/25 | 22/25 | |||||
genome
MO
|
5' AAAATGTTGCCAAAAGAGGAGGAAT 3' ||||||||||||||||||||||||| 3' TTTTACAACGGTTTTCTCCTCCTTA 5' |
5' AAAATGCTACCAAAAGAGGAAGAAT 3' |||||| | ||||||||||| |||| 3' TTTTACAACGGTTTTCTCCTCCTTA 5' |
|||||
| Genomic Alignments |
Position | Identity | Strand | Target | Target mRNA | ||
| laevis 10.1 | Chr9_10L:29555027..29555051 | 22/25 | Antisense | target | ccdc57.L | ||
| Chr7L:47029042..47029066 | 21/25 | Antisense | off-target | grid1.L | |||
| Chr4L:113402370..113402394 | 21/25 | Antisense | off-target | brinp3.L | |||
| Chr2S:33890840..33890864 | 22/25 | unknown | |||||
| Chr2S:33944417..33944441 | 22/25 | unknown | |||||
| Chr2S:32849891..32849915 | 22/25 | unknown | |||||
| Chr2S:32941009..32941033 | 22/25 | unknown | |||||
| Chr2S:33097042..33097066 | 22/25 | unknown | |||||
| Chr2S:33457920..33457944 | 22/25 | unknown | |||||
| Chr2L:25905519..25905543 | 21/25 | unknown | tropicalis 10.0 | Chr10:27522896..27522920 | 25/25 | Antisense | target | ccdc57 |
| Chr7:51752489..51752513 | 21/25 | Antisense | off-target | nrg3 | |||
| Chr5:19468623..19468647 | 21/25 | Antisense | off-target | srbd1 | |||
| Chr1:102637838..102637862 | 21/25 | Antisense | off-target | plekhj1 | |||
| Chr2:22714227..22714251 | 21/25 | unknown | |||||
| Publications | |||||||
| ???morpholino.displaySummary.papersFirst??? |
Ccdc57 regulates cilia and left-right patterning in Xenopus., Biol Open 2026 |
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| ???morpholino.displaySummary.papersRecent??? | |||||||
| ???morpholino.displaySummary.papersAll??? | |||||||
